The saga has outraged gay rights and AIDS awareness groups who have criticised the media's role and say it shows lingering anti-gay sentiment in Taiwan, which is working towards becoming the first country in Asia to legalise gay marriages.
The pictures were first broadcast by major news networks last week after police said they showed a weekend raid on a drug and sex orgy.
They were rebroadcast again and again after blood tests ordered by authorities found that 28 of the 92 men had HIV, which causes AIDS.
Then neighbours of the men were shown saying they were so scared of being infected with HIV that they had disinfected their homes, and police officers who had questioned the men said they had cleaned their seats immediately afterwards.
The episode shows that homosexuality is stigmatised in Taiwan as synonymous with AIDS, Gender-Sexuality Rights Association of Taiwan spokeswoman Wang Ping said.
Ironically the discovery in the raid of condoms, an important protection against AIDS, has become evidence of their "crime" in this case, Wang told AFP.
Hundreds of used condoms were found, but health authorities have insisted the men were engaging in "dangerous sexual behavior" under the influence of drugs.
They have said they would recommend the prosecution of 14 of the HIV positive men for knowingly spreading the disease to others.
People convicted of this offence can be jailed for up to seven years under an anti-AIDS law which also empowers authorities to order blood tests on high-risk groups, including the sexual partners of HIV carriers and drug users.
"While paying concern to the rights of HIV/AIDS patients, we also want to urge people to cherish their own lives and respect others'," said Health Minister Chen Chien-jen.
But Wang said: "The case has caused panic in local society through the media coverage. But the government has failed to give the public the correct information on the disease, which does not transmit through mere physical contacts."
Taiwan has a low rate of HIV/AIDS infection compared with other countries in the Asia-Pacific region, with just over 5,000 people infected since 1984 out of a population of 23 million, according to the Center for Disease Control (CDC).
It says 911 people have died from AIDS on the island.
Activists say the implementation of the anti-AIDS law could violate the rights of homosexuals and HIV patients, as shown by the weekend raid, and discourage people from testing themselves for HIV/AIDS.
This was shown to be true when the Department of Health breached the privacy of the men who tested positive for HIV by leaking their personal information to police, said Ivory Lin, secretary general of a group called Persons with HIV/AIDS Rights Advocacy Association of Taiwan.
"A gay friend e-mailed me today saying he had given up on a plan to go for a blood test after the incident," Lin said.
"The men should at least have been allowed to put on their clothes before police expose them to cameras."
Activists said that while the incident may have alerted the public to the large number of HIV carriers among homosexuals, it did not tell the whole story -- that heterosexual couples are not any safer from infection than their gay counterparts.
Of Taiwan's 5,221 HIV/AIDS patients, 2,080 were infected through heterosexual contact, 1,896 of them homosexual and 622 bisexual, according to CDC data.
"People almost forgot the heterosexual community would expose themselves to the same risk unless practising safe-sex," said Wu Hsu-liang, a spokesman for the Taiwan Tongzhi Hotline Association that promotes gay rights.
The incident perhaps shows that the majority of Taiwanese are not ready to fully accept homosexuals, even as the cabinet is drafting a bill which will allow gay marriages and grant gay couples the right to adopt children, said Wu.
"The way the news was handled was typical of a discriminatory, voyeuristic mentality, designed to send viewers the message, 'Yuck! it's disgusting. Everybody come have a look!'" he said.
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